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Licensed Unlicensed Requires Authentication Published by De Gruyter February 28, 2013

Pan-genomic binding of hypoxia-inducible transcription factors

  • Johannes Schödel EMAIL logo , David Robert Mole and Peter John Ratcliffe
From the journal Biological Chemistry

Abstract

Hypoxia-inducible transcription factors (HIFs) mediate the cellular response to hypoxia. HIF-DNA binding triggers a transcriptional program that acts to both restore oxygen homeostasis and adapt cells to low oxygen availability. In this context, HIF is centrally involved in many physiologic and pathophysiological processes such as development, high altitude adaptation, ischemic disease, inflammation, and cancer. The recent development of chromatin immunoprecipitation coupled to genome-wide DNA sequence analysis allows the position and extent of HIF binding to DNA to be characterized across the entire genome and correlated with genetic, epigenetic, and transcriptional analyses. This review summarizes recent pan-genomic analyses of HIF binding and HIF-dependent transcriptional regulation.


Corresponding author: Johannes Schödel, Department of Nephrology and Hypertension, Friedrich-Alexander-University Erlangen-Nuremberg, Ulmenweg 18, D-91054 Erlangen, Germany

Received: 2012-12-12
Accepted: 2012-12-22
Published Online: 2013-02-28
Published in Print: 2013-04-01

©2013 by Walter de Gruyter Berlin Boston

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