Table 3

List of paper figure generating scripts

NameDescriptionCommand line
paperFigures
Synth.m
Plots all figures estimating algorithm performance for synthetic data
analysis (paper Figs. 1, 46, and 8)
$ matlab -r “paperFiguresSynth”
paperFigures
Real.m
Plots all figures estimating algorithm performance for real physiology
data analysis (paper Fig. 7)
$ matlab -r “paperFiguresReal”
paperFigures
Splits.m
For diagnostics; plots figures estimating algorithm performance over
all the regimes (unphysiological, canonical, and physiologic)
$ cd ../src && matlab -r “paperFiguresSplits”
  • All these functions should be run from the cloned respository, TimeCellAnalysis/ρ-matlab/paperFigures.