Primers used
Set | FP/RP | Primer sequence | Gene name | Vector backbone |
---|---|---|---|---|
Set 1 | FP | CGATGGCCGGCCACCATGGCACGCTTAGGCTTGCTC | Gpc4 | pCAG GPC4 |
RP | GCACTTCCGAGCAACTTTTC | |||
Set 2 | FP | CCACCATGGCACGCTTAGGCTTGCTCGCGCTCCTCTGCACCCTGGCCGCGCTCAGCGCCTCGCTGCTGGCTGATATCGCGGAGCT | Gpc4 (endogenous signal peptide) | pCAG GPC4 |
RP | CCGCGATATCAGCCAGCAGCGAGGCGCTGAGCGCGGCCAGGGTGCAGAGGAGCGCGAGCAAGCCTAAGCGTGCCATGGTGGCCGG | |||
Set 3 | FP | TCGCTGCTGGCTGATATGGTCTTCACACTCGAAGATTTCG | Nano luciferase | pCAG GPC4 |
RP | CTTGAGCTCCGCGATCTTATCGTCGTCATCCTTGTAATCCGCCAGAATGCGTTCGCACAG | |||
Set 4 | FP | ATAGGCTAGCCTCGAGACCATGGCACGCTTAGGCTTG | Nluc-GPC4 | pZac2.1 Nluc-GPC4 |
RP | CCGGGTCGACTCTAGATTATCTCCACTCTCCCTGCAC | |||
Set 4A | RP | ATCGTCTAGATCATTACTTGTACAGCTCGTCCAT | Nluc-GPC4TM | |
Set 5 | FP | ATTCTGGCGTCCGGAAAAAAGCGGCCAAAGCCTGGA | Prion | pZac2.1 Nluc-Prion |
RP | TCCAGGCTTTGGCCGCTTTTTTCCGGACGCCAGAAT | |||
Set 6 | FP | AATTCGCGCCTAGGTCCGAACCCCGTTCGGACCTAGGCGCGAATTATTTTT | shRNA control | pSilencer 1.0 U6 |
RP | AATTAAATTCGCGCCTAGGTCCGAACGGGGTTCGGACCTAGGCGCGAATTGGCC | |||
Set 7 | FP | ACAAGAACCACAATTACTAGATCAAGAGTCTAGTAATTGTGGTTCTTGTATTTTT | Adam9 shRNA1 | pSilencer 1.0 U6 |
RP | AATTAAAAATACAAGAACCACAATTACTAGACTCTTGATCTAGTAATTGTGGTTCTTGTGGCC | |||
Set 7A | FP | GCCAATAACGTCTGCATTTTCAAGAGAAATGCAGACGTTATTGGCATTTTT | Adam9 shRNA2 | pSilencer 1.0 U6 |
RP | AATTAAAAATGCCAATAACGTCTGCATTTTCAAGAGAAATGCAGACGTTATTGGCGGCC | |||
Set 8 | FP | GCAAATGATACCCTTACAGTTTCAAGAGAACTGTAAGGGTATCATTTGCATTTTT | Adam10 shRNA1 | pSilencer 1.0 U6 |
RP | AATTAAAAATGCAAATGATACCCTTACAGTTCTCTTGAAACTGTAAGGGTATCATTTGCGGCC | |||
Set 8A | FP | GGAAGACAGTTCAACCTACGATCAAGAGTCGTAGGTTGAACTGTCTTCCATTTTT | Adam10 shRNA2 | pSilencer 1.0 U6 |
RP | AATTAAAAATGGAAGACAGTTCAACCTACGACTCTTGATCGTAGGTTGAACTGTCTCCGGCC | |||
Set 9 | FP | GGGGTGTGTAACAGCAATAAG | ADAM9 | Sequencing primers |
RP | CAAGGGGGACGATTAGGAAG | |||
Set 10 | FP | AACAGGCTTATCGCTATG | ADAM10 | Sequencing primers |
RP | CTGCTGCTGACTTCTAAT | |||
Set 11 | FP | CTGGAGAAACCTGCCAAGTA | GAPDH | Sequencing primers |
RP | AGTGGGAGTTGCTGTTGAAG |