Docking strand and imaging probe sequences used in PRISM
| Sequence name | Docking strand sequence (5′ to 3′) | ssLNA imaging probe sequence (5′ to 3′) |
|---|---|---|
| p1 | TTATACATCTA | T*AGAT*G*TATAA |
| p2 | TTATCTACATA | TATGT*A*G*ATAA |
| p3 | TTTCTTCATTA | TAAT*G*A*AGAAA |
| p4 | TTATGAATCTA | TA*GAT*T*CATAA |
| p5 | Not used in this study | Not used in this study |
| p6 | TTAATTGAGTA | T*A*CTCAATTAA |
| p7 | TTAATTAGGAT | A*T*CCT*AATTAA |
| p8 | TTATAATGGAT | A*T*CC*ATTATAA |
| p9 | TTTAATAAGGT | A*CC*T*TATTAAA |
| p10 | TTATAGAGAAG | C*T*TC*TCTATAA |
| p11 | Not used in this study | Not used in this study |
| p12 | TTATAGTGATT | A*ATC*A*CTATAA |
LNA substitutions are indicated with * following the LNA nucleotide.