RT Journal Article
SR Electronic
T1 Machine Learning Elucidates Electrophysiological Properties Predictive of Multi- and Single-Firing Human and Mouse Dorsal Root Ganglia Neurons
JF eneuro
JO eNeuro
FD Society for Neuroscience
SP ENEURO.0248-24.2024
DO 10.1523/ENEURO.0248-24.2024
VO 11
IS 10
A1 Zurek, Nesia A.
A1 Thiyagarajan, Sherwin
A1 Ehsanian, Reza
A1 Goins, Aleyah E.
A1 Goyal, Sachin
A1 Shilling, Mark
A1 Lambert, Christophe G.
A1 Westlund, Karin N.
A1 Alles, Sascha R. A.
YR 2024
UL http://www.eneuro.org/content/11/10/ENEURO.0248-24.2024.abstract
AB Human and mouse dorsal root ganglia (hDRG and mDRG) neurons are important tools in understanding the molecular and electrophysiological mechanisms that underlie nociception and drive pain behaviors. One of the simplest differences in firing phenotypes is that neurons are single-firing (exhibit only one action potential) or multi-firing (exhibit 2 or more action potentials). To determine if single- and multi-firing hDRG neurons exhibit differences in intrinsic properties, firing phenotypes, and AP waveform properties, and if these properties could be used to predict multi-firing, we measured 22 electrophysiological properties by whole-cell patch-clamp electrophysiology of 94 hDRG neurons from six male and four female donors. We then analyzed the data using several machine learning models to determine if these properties could be used to predict multi-firing. We used 1,000 iterations of Monte Carlo cross-validation to split the data into different train and test sets and tested the logistic regression, k-nearest neighbors, random forest, support vector classifier, and XGBoost machine learning models. All models tested had a >80% accuracy on average, with support vector classifier, and XGBoost performing the best. We found that several properties correlated with multi-firing hDRG neurons and together could be used to predict multi-firing neurons in hDRG including a long decay time, a low rheobase, and long first spike latency. We also found that the hDRG models were able to predict multi-firing with 90% accuracy in mDRG neurons. Understanding these properties could be beneficial in the elucidation of targets on peripheral sensory neurons related to pain.