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Research ArticleResearch Article: Methods/New Tools, Novel Tools and Methods

Validating a Computational Framework for Ionic Electrodiffusion with Cortical Spreading Depression as a Case Study

Ada J. Ellingsrud, Didrik B. Dukefoss, Rune Enger, Geir Halnes, Klas Pettersen and Marie E. Rognes
eNeuro 1 April 2022, 9 (2) ENEURO.0408-21.2022; DOI: https://doi.org/10.1523/ENEURO.0408-21.2022
Ada J. Ellingsrud
1Department for Numerical Analysis and Scientific Computing, Simula Research Laboratory, Oslo 0164, Norway
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Didrik B. Dukefoss
2Letten Centre, Division of Anatomy, Department of Molecular Medicine, Institute of Basic Medical Sciences, University of Oslo, Oslo 0317, Norway
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Rune Enger
2Letten Centre, Division of Anatomy, Department of Molecular Medicine, Institute of Basic Medical Sciences, University of Oslo, Oslo 0317, Norway
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Geir Halnes
3CINPLA, Faculty of Mathematics and Natural Sciences, University of Oslo, Oslo 0316, Norway
4Institute of Physics, Faculty of Science and Technology, Norwegian University of Life Sciences, Ås 1432, Norway
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Klas Pettersen
5NORA, Faculty of Mathematics and Natural Sciences, University of Oslo, Oslo 0316, Norway
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Marie E. Rognes
1Department for Numerical Analysis and Scientific Computing, Simula Research Laboratory, Oslo 0164, Norway
6Department of Mathematics, Faculty of Mathematics and Natural Sciences, University of Bergen, Bergen 5020, Norway
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Article Information

DOI 
https://doi.org/10.1523/ENEURO.0408-21.2022
PubMed 
35365505
Published By 
Society for Neuroscience
History 
  • Received September 24, 2021
  • Revision received February 21, 2022
  • Accepted March 12, 2022
  • Published online April 1, 2022.
Copyright & Usage 
Copyright © 2022 Ellingsrud et al. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license, which permits unrestricted use, distribution and reproduction in any medium provided that the original work is properly attributed.

Author Information

  1. Ada J. Ellingsrud1,
  2. Didrik B. Dukefoss2,
  3. Rune Enger2,
  4. Geir Halnes3,4,
  5. Klas Pettersen5 and
  6. Marie E. Rognes1,6
  1. 1Department for Numerical Analysis and Scientific Computing, Simula Research Laboratory, Oslo 0164, Norway
  2. 2Letten Centre, Division of Anatomy, Department of Molecular Medicine, Institute of Basic Medical Sciences, University of Oslo, Oslo 0317, Norway
  3. 3CINPLA, Faculty of Mathematics and Natural Sciences, University of Oslo, Oslo 0316, Norway
  4. 4Institute of Physics, Faculty of Science and Technology, Norwegian University of Life Sciences, Ås 1432, Norway
  5. 5NORA, Faculty of Mathematics and Natural Sciences, University of Oslo, Oslo 0316, Norway
  6. 6Department of Mathematics, Faculty of Mathematics and Natural Sciences, University of Bergen, Bergen 5020, Norway
  1. Correspondence should be addressed to Ada J. Ellingsrud at ada{at}simula.no.
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Author contributions

  1. Author contributions: A.J.E., D.B.D., R.E., G.H., K.P., and M.E.R. designed research; A.J.E. and M.E.R. performed research; A.J.E. and M.E.R. contributed unpublished reagents/analytic tools; A.J.E., D.B.D., R.E., G.H., K.P., and M.E.R. analyzed data; A.J.E., D.B.D., R.E., G.H., K.P., and M.E.R. wrote the paper.

Disclosures

  • The authors declare no competing financial interests.

  • This work was supported by the European Research Council (ERC) under the European Union’s Horizon 2020 Research and Innovation Programme Grant 714892, the EU Project (Horizon 2020) HBP SGA3 Grant 945539, Research Council of Norway Grants 249988 and 202326, the Olav Thon Foundation, and the Letten Foundation.

Funding

  • EC | European Research Council (ERC)

    714892; 714892; 945539
  • RCN | The Research Council of Norway

    249988; 202326
  • The Olav Thon Foundation

  • The Letten Foundation

Other Version

  • previous version (April 01, 2022).
  • You are viewing the most recent version of this article.

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Validating a Computational Framework for Ionic Electrodiffusion with Cortical Spreading Depression as a Case Study
Ada J. Ellingsrud, Didrik B. Dukefoss, Rune Enger, Geir Halnes, Klas Pettersen, Marie E. Rognes
eNeuro 1 April 2022, 9 (2) ENEURO.0408-21.2022; DOI: 10.1523/ENEURO.0408-21.2022

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Validating a Computational Framework for Ionic Electrodiffusion with Cortical Spreading Depression as a Case Study
Ada J. Ellingsrud, Didrik B. Dukefoss, Rune Enger, Geir Halnes, Klas Pettersen, Marie E. Rognes
eNeuro 1 April 2022, 9 (2) ENEURO.0408-21.2022; DOI: 10.1523/ENEURO.0408-21.2022
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Keywords

  • computational modelling
  • cortical spreading depression
  • ionic electrodiffusion and osmosis
  • validation

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