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Research ArticleResearch Article: Methods/New Tools, Novel Tools and Methods

Machine Learning for Neural Decoding

Joshua I. Glaser, Ari S. Benjamin, Raeed H. Chowdhury, Matthew G. Perich, Lee E. Miller and Konrad P. Kording
eNeuro 31 July 2020, 7 (4) ENEURO.0506-19.2020; DOI: https://doi.org/10.1523/ENEURO.0506-19.2020
Joshua I. Glaser
1Interdepartmental Neuroscience Program, Northwestern University, Chicago, Illinois 60611
2Department of Physical Medicine & Rehabilitation, Feinberg School of Medicine, Northwestern University, Chicago, Illinois 60611
3Shirley Ryan AbilityLab, Chicago, Illinois 60611
7Department of Bioengineering, School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, Pennsylvania 19104
9Department of Statistics, Columbia University, New York, New York 10027
10Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, New York 10027
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Ari S. Benjamin
7Department of Bioengineering, School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, Pennsylvania 19104
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Raeed H. Chowdhury
4Department of Physiology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois 60611
5Department of Biomedical Engineering, McCormick School of Engineering, Northwestern University, Evanston, Illinois 60208
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Matthew G. Perich
4Department of Physiology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois 60611
5Department of Biomedical Engineering, McCormick School of Engineering, Northwestern University, Evanston, Illinois 60208
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Lee E. Miller
2Department of Physical Medicine & Rehabilitation, Feinberg School of Medicine, Northwestern University, Chicago, Illinois 60611
3Shirley Ryan AbilityLab, Chicago, Illinois 60611
4Department of Physiology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois 60611
5Department of Biomedical Engineering, McCormick School of Engineering, Northwestern University, Evanston, Illinois 60208
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Konrad P. Kording
2Department of Physical Medicine & Rehabilitation, Feinberg School of Medicine, Northwestern University, Chicago, Illinois 60611
3Shirley Ryan AbilityLab, Chicago, Illinois 60611
4Department of Physiology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois 60611
5Department of Biomedical Engineering, McCormick School of Engineering, Northwestern University, Evanston, Illinois 60208
6Department of Engineering Sciences & Applied Mathematics, McCormick School of Engineering, Northwestern University, Evanston, Illinois 60208
7Department of Bioengineering, School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, Pennsylvania 19104
8Department of Neuroscience, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104
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Article Information

DOI 
https://doi.org/10.1523/ENEURO.0506-19.2020
PubMed 
32737181
Published By 
Society for Neuroscience
History 
  • Received December 4, 2019
  • Revision received July 1, 2020
  • Accepted July 3, 2020
  • Published online July 31, 2020.
Copyright & Usage 
Copyright © 2020 Glaser et al. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license, which permits unrestricted use, distribution and reproduction in any medium provided that the original work is properly attributed.

Author Information

  1. Joshua I. Glaser1,2,3,7,9,10,
  2. Ari S. Benjamin7,
  3. Raeed H. Chowdhury4,5,
  4. Matthew G. Perich4,5,
  5. Lee E. Miller2,3,4,5 and
  6. Konrad P. Kording2,3,4,5,6,7,8
  1. 1Interdepartmental Neuroscience Program, Northwestern University, Chicago, Illinois 60611
  2. 2Department of Physical Medicine & Rehabilitation, Feinberg School of Medicine, Northwestern University, Chicago, Illinois 60611
  3. 3Shirley Ryan AbilityLab, Chicago, Illinois 60611
  4. 4Department of Physiology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois 60611
  5. 5Department of Biomedical Engineering, McCormick School of Engineering, Northwestern University, Evanston, Illinois 60208
  6. 6Department of Engineering Sciences & Applied Mathematics, McCormick School of Engineering, Northwestern University, Evanston, Illinois 60208
  7. 7Department of Bioengineering, School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, Pennsylvania 19104
  8. 8Department of Neuroscience, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104
  9. 9Department of Statistics, Columbia University, New York, New York 10027
  10. 10Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, New York 10027
  1. Correspondence should be addressed to Joshua I. Glaser at joshglaser88{at}gmail.com.
View Full Text

Author contributions

  1. Author contributions: J.I.G., L.E.M., and K.P.K. designed research; J.I.G., A.S.B., R.H.C., and M.G.P. performed research; J.I.G. and K.P.K. analyzed data; J.I.G., A.S.B., R.H.C., M.G.P., L.E.M., and K.P.K. wrote the paper.

View Abstract

Disclosures

  • The authors declare no competing financial interests.

  • J.I.G. was supported by National Institutes of Health (NIH) Grants F31-EY-025532 and T32-HD-057845, National Science Foundation NeuroNex Award DBI-1707398, and the Gatsby Charitable Foundation. A.S.B. was supported by NIH Grant MH-103910. M.G.P. was supported by NIH Grants F31-NS-092356 and T32-HD-07418. R.H.C. was supported by NIH Grants R01-NS-095251 and DGE-1324585. L.E.M. was supported by NIH Grants R01-NS-074044 and R01-NS-095251. K.P.K. was supported by NIH Grants R01-NS-074044, R01-NS-063399, and R01-EY-021579.

Funding

  • HHS | NIH | National Eye Institute (NEI)

  • HHS | NIH | National Institute of Neurological Disorders and Stroke (NINDS)

  • HHS | NIH | National Institute of Mental Health (NIMH)

Other Version

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Machine Learning for Neural Decoding
Joshua I. Glaser, Ari S. Benjamin, Raeed H. Chowdhury, Matthew G. Perich, Lee E. Miller, Konrad P. Kording
eNeuro 31 July 2020, 7 (4) ENEURO.0506-19.2020; DOI: 10.1523/ENEURO.0506-19.2020

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Machine Learning for Neural Decoding
Joshua I. Glaser, Ari S. Benjamin, Raeed H. Chowdhury, Matthew G. Perich, Lee E. Miller, Konrad P. Kording
eNeuro 31 July 2020, 7 (4) ENEURO.0506-19.2020; DOI: 10.1523/ENEURO.0506-19.2020
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Keywords

  • Neural decoding
  • machine learning
  • Neural data analysis
  • Deep learning
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  • hippocampus

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