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Research ArticleMethods/New Tools, Novel Tools and Methods

neuTube 1.0: A New Design for Efficient Neuron Reconstruction Software Based on the SWC Format

Linqing Feng, Ting Zhao and Jinhyun Kim
eNeuro 2 January 2015, 2 (1) ENEURO.0049-14.2014; DOI: https://doi.org/10.1523/ENEURO.0049-14.2014
Linqing Feng
1Center for Functional Connectomics, Korea Institute of Science and Technology (KIST), Seoul, 136-791, Korea
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Ting Zhao
2Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, Virginia, 20147
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Jinhyun Kim
1Center for Functional Connectomics, Korea Institute of Science and Technology (KIST), Seoul, 136-791, Korea
3Neuroscience Program, University of Science and Technology, Daejeon, 305-350, Korea
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Article Information

DOI 
https://doi.org/10.1523/ENEURO.0049-14.2014
PubMed 
26464967
Published By 
Society for Neuroscience
History 
  • Received October 30, 2014
  • Revision received December 23, 2014
  • Accepted December 23, 2014
  • Published online January 2, 2015.
Copyright & Usage 
Copyright © 2015 Feng et al. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International, which permits unrestricted use, distribution and reproduction in any medium provided that the original work is properly attributed.

Author Information

  1. Linqing Feng1,*,
  2. Ting Zhao2,* and
  3. Jinhyun Kim1,3
  1. 1Center for Functional Connectomics, Korea Institute of Science and Technology (KIST), Seoul, 136-791, Korea
  2. 2Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, Virginia, 20147
  3. 3Neuroscience Program, University of Science and Technology, Daejeon, 305-350, Korea
  1. Correspondence should be addressed to either Dr. Ting Zhao, Janelia Research Campus, Howard Hughes Medical Institute, 19700 Helix Drive, Ashburn, VA 20147, E-mail: zhaot{at}janelia.hhmi.org; or Dr. Jinhyun Kim, Center for Functional Connectomics, Korea Institute of Science and Technology (KIST), 39-1 Hawolgokdong, Seoul, 136-791, Korea, E-mail: kimj{at}kist.re.kr.
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Author contributions

  1. ↵2 Author Contributions: L.F., T.Z., and J.K. designed research; L.F. and T.Z. performed research; L.F. and T.Z. analyzed data; L.F., T.Z., and J.K. wrote the paper.

  2. ↵* L.F. and T.Z. contributed equally to this work.

View Abstract

Disclosures

  • ↵1 Authors report no conflict of interest.

  • ↵3 This work was supported by the KIST Institutional Program (Project No. 2E24210) and WCI Program (NRF Grant Number: WCI 2009-003). T.Z. is supported by Howard Hughes Medical Institute.

Funding

  • KIST Institutional Program

    Project No. 2E24210
  • WCI Program

    NRF Grant Number: WCI 2009-003
  • Howard Hughes Medical Institute

Other Version

  • previous version (January 02, 2015).
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neuTube 1.0: A New Design for Efficient Neuron Reconstruction Software Based on the SWC Format
Linqing Feng, Ting Zhao, Jinhyun Kim
eNeuro 2 January 2015, 2 (1) ENEURO.0049-14.2014; DOI: 10.1523/ENEURO.0049-14.2014

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neuTube 1.0: A New Design for Efficient Neuron Reconstruction Software Based on the SWC Format
Linqing Feng, Ting Zhao, Jinhyun Kim
eNeuro 2 January 2015, 2 (1) ENEURO.0049-14.2014; DOI: 10.1523/ENEURO.0049-14.2014
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Keywords

  • bioimage informatics
  • neuron tracing
  • SWC
  • user-friendly software

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