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Research ArticleResearch Article: New Research, Cognition and Behavior

Bayesian and Discriminative Models for Active Visual Perception across Saccades

Divya Subramanian, John M. Pearson and Marc A. Sommer
eNeuro 14 July 2023, 10 (7) ENEURO.0403-22.2023; https://doi.org/10.1523/ENEURO.0403-22.2023
Divya Subramanian
1Department of Neurobiology, Duke School of Medicine, Duke University, Durham, NC 27710
2Center for Cognitive Neuroscience, Duke University, Durham, NC 27708
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John M. Pearson
1Department of Neurobiology, Duke School of Medicine, Duke University, Durham, NC 27710
2Center for Cognitive Neuroscience, Duke University, Durham, NC 27708
3Department of Biostatistics & Bioinformatics, Duke School of Medicine, Duke University, Durham, NC 27710
5Department of Psychology & Neuroscience, Trinity College of Arts and Sciences, Duke University, Durham, NC 27708
6Duke Institute for Brain Sciences, Duke University, Durham, NC 27708
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Marc A. Sommer
1Department of Neurobiology, Duke School of Medicine, Duke University, Durham, NC 27710
2Center for Cognitive Neuroscience, Duke University, Durham, NC 27708
4Department of Biomedical Engineering, Pratt School of Engineering, Duke University, Durham, NC 27708
5Department of Psychology & Neuroscience, Trinity College of Arts and Sciences, Duke University, Durham, NC 27708
6Duke Institute for Brain Sciences, Duke University, Durham, NC 27708
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  • Extended Data
  • Figure 1.
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    Figure 1.

    Experimental design. a, Judging whether an object is stable or moves during a saccade involves comparing a motor-driven prediction with sensory input. We tested whether this process is Bayesian. b, Schematic of the SSD task. Participants fixated on a central cross and on being cued, made a saccade to a peripheral target which either jumped or did not jump during the saccade. Participants reported whether they perceived it as having jumped or not. White circle: eye position. c, Schematic of main experimental variables. Middle, larger panels, “Baseline” condition with neutral prior P(J) = 0.5 and low uncertainty (minimal blur). High (0.9) and low (0.1) priors were cued by the color of the fixation cross (top dashed box). Sensory noise was manipulated by the width of the Gaussian target (bottom dashed box). d, Trial breakdown for Experiment 2. Numbers in the boxes indicate the overall proportion of each trial type. Blocks of high and low priors followed a baseline block (gray). 70% of trials in the prior blocks (i.e., in the orange or teal rows) were prior-training trials with low uncertainty and priors matched to true jump probability (results shown in Fig. 3). For each prior, training trials constituted 32.3% of all trials in the experiment. 30% were hypothesis testing trials with medium-uncertainty and high-uncertainty targets. Fixation colors cued the learned priors although the true jump probability was 0.5 (results shown in Fig. 4). Hypothesis testing trials formed 6.9% of all presented trials at each uncertainty level.

  • Figure 2.
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    Figure 2.

    Evaluation of methods for manipulating image noise. Top row shows psychometric curves in the low (black) and high (red) noise conditions. Bins averaged across participants. Error bars: SEM. Curves were fit to pooled data. Bottom row shows d’ values in the two noise conditions. Gray lines: individual participants. Markers and error bars: means and SEM across participants. a, e, Congruent and incongruent arrow stimulus. b, f, Gaussian cloud of points. c, g, High and low contrast stimuli. d, h, Gaussian blob stimulus (emphasized by a gray box since it is the manipulation we selected to use for the rest of the experiments). *p < 0.0125.

  • Figure 3.
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    Figure 3.

    Participants learned the priors. a–c, Bayesian ideal observer models for the three prior conditions. d, Bayesian predictions for prior learning. e, Intercepts for curves in d. f, Psychometric curves from n = 17 participants. Psychometric curves split by the direction of the displacement relative to the saccade direction are shown in Extended Data Figure 3-1. g, Intercepts for curves in f, fit to individual participants, matched Bayesian predictions in e. ***p < 0.001.

  • Figure 4.
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    Figure 4.

    Categorical judgments of displacement are anti-Bayesian. a, b, Predicted psychometric curves from the Bayesian ideal observer model for the (a) medium-noise and (b) high-noise conditions. c, High-low prior intercept differences for the curves in a, b. d–f, Results from n = 17 participants for the (d) medium-noise and (e) high-noise conditions, and (f) the respective high-low prior intercept differences. **p < 0.01. Extended Data Figure 4-1 shows that the results replicate using Criterion as a measure of prior use. g, h, Results from a control experiment run on monkeys, in which the true jump probability matched the prior for the medium-noise and high-noise trials. g, Trial breakdown. h, i, High-low prior intercept difference across noise levels for (h) Monkey S and (i) Monkey T. ****p < 0.0001, *p < 0.05. Extended Data Figure 4-2 shows results when the difference in the “jump” response rates for all displacements, rather than just the intercepts, were used as a measure of prior use. Extended Data Figure 4-3 shows that the results in the control experiment did not change between sessions in the first and second halves of the experiment. Extended Data Figure 4-4 shows the results of fitting the Bayesian ideal observer model to the data in Experiment 2.

  • Figure 5.
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    Figure 5.

    Continuous displacement perception is Bayesian. a, Task schematic. Participants performed the same SSD task as in Experiments 1 and 2 but provided a continuous estimate of where the target landed after the saccade using a mouse cursor (+). b, Distributions used in the experiment. Distributions for the three noise levels are centered on displacement = 1° for illustration. c, Bayesian predictions for the experimental parameters in b. d, e, Results from n = 11 participants for displacements in the direction of the saccade (d) and opposite to the direction of the saccade (e). Bins were averaged across participants and connected with lines. Error bars: SEM. f, Presented versus reported displacements relative to the direction of the saccade (positive = in saccade direction, negative = opposite to saccade direction). Lines were fit to individuals and averaged across participants. Shaded region: SEM. Participants exhibited a response bias opposite to the direction of the saccade. g, h, Bayesian predictions with biased priors (against the direction of the saccade, as observed in f for displacements in the saccade direction (g) and opposite to the saccade direction (h). i, j, Model fits for participants’ internal likelihood distribution SDs (i) and prior means (j). *p < 0.05, **p < 0.01, ****p < 0.0001. Extended Data Figure 5-1 shows the results of incorporating the observed bias into the categorical Bayesian ideal observer model.

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    Figure 6.

    Image noise versus motor-driven noise. a–d, Saccade endpoint error scatter across the three image noise levels in Experiments 2 (Categorical) and 3 (Continuous), as quantified in the directions (a, c) perpendicular and (b, d) parallel to the saccade. e, f, In monkeys, we separately tested how prior use changes with (e) image noise in Experiment 4 and (f) motor-driven noise in Experiment 5; for each experiment, the rationale (left), task events and stimulus configurations (middle), and trial breakdown (right) are schematized.

  • Figure 7.
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    Figure 7.

    Monkeys were anti-Bayesian for image noise. Monkey S: 10,130 trials from nine sessions. Monkey T: 9958 trials from 18 sessions. 95% confidence intervals bootstrapped from 10,000 samples. a–c, Both animals’ performance in prior learning trials in terms of psychometric curves (a: Monkey S; b: Monkey T) and intercept differences (c: both monkeys) matched the predictions of the Bayesian ideal observer model in Figure 3d,e. d–i, Prior use for both monkeys (d–f: Monkey S; g–i: Monkey T) was anti-Bayesian. They showed greater prior use in the medium-noise condition (d, g) than in the high-noise condition (e, h), as quantified by the intercept differences (f, i). Extended Data Figures 7-1 and 7-2 show psychometric curves split by the direction of the displacement relative to the saccade direction for Monkeys S and T, respectively. Extended Data Figure 7-3 shows that the results replicate when using Criterion instead of the intercept as a measure of prior use. Extended Data Figures 7-4 and 7-5 show the results of fitting the Bayesian ideal observer model to the data in Experiment 4 for Monkeys S and T, respectively.

  • Figure 8.
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    Figure 8.

    Monkeys were Bayesian for motor-related noise. Top row (a–c), Predictions of the Bayesian ideal observer model for two levels of motor-driven noise. Middle row (d–f), Results from Monkey S. Lower row (g–i), Results from Monkey T. Unlike for image noise (Figs. 4h,i, 7), the monkeys were decisively Bayesian in their use of priors to compensate for sensory uncertainty introduced by making a saccade. Extended Data Figure 8-1 shows that the results replicate when measuring Criterion. Extended Data Figure 8-2 shows psychometric curves split by the direction of displacement relative to the saccade direction.

  • Figure 9.
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    Figure 9.

    Discriminative (Perceptron) learning model. a, b, Early training results (Monkey S trials 1–500 and Monkey T trials 1–350 for each prior). c, Schematic of the discriminative model. d, Change in weights with each trial. e, Simulations of prior learning under the same conditions as the prior training trials in Experiment 2 on humans. Bins: averaged across 10,000 simulations. Error bars: 95% CI. Psychometric curves are averaged across the simulations (blips at small displacements are an artifact of averaging across different inflection points).

  • Figure 10.
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    Figure 10.

    Combined Bayesian and discriminative model. a, Schematic of the Bayesian model output (from Fig. 3a) on the left being combined with the output from the discriminative (Perceptron) model. b–d, Psychometric curves simulated under the same experimental conditions as the human experiment for (b) low-noise, (c) medium-noise, and (d) high-noise levels. Bins: averaged across 10,000 simulations. Error bars: 95% CI. Psychometric curves are averaged across the simulations (blips at small displacements are an artifact of averaging across different inflection points). e, Intercept differences across the medium-noise and high-noise conditions. f, g, Late training data for (f) the combined model and (g) the discriminative model alone.

Extended Data

  • Figures
  • Extended Data Figure 3-1

    The direction of target displacement relative to the saccade did not influence the results of Experiment 2. Top, Data from displacements in the direction of the saccade. Bottom, Data from displacements opposite to the direction of the saccade. a, d, Data from prior learning trials. Participants demonstrated that they learned the prior regardless of the direction of the displacement (compare to pooled data in Fig. 3f). b, e, Data from hypothesis-testing, medium-noise trials. c, f, Data from hypothesis-testing, high-noise trials. As with the pooled data (Fig. 4d,e), prior use decreased with increasing noise for both displacement directions. Plotting conventions are the same as in Figures 3 and 4. Overall, the direction of target displacement relative to the saccade did not matter, as seen by comparing the data shown here with the pooled data of Figures 3 and 4. Download Figure 3-1, TIF file.

  • Extended Data Figure 4-1

    Replication of the Experiment 2 results using Criterion instead of intercepts. a, Criterion decreased with the prior magnitude, demonstrating that the human participants learned the priors in training trials. Note that a lower Criterion value meant that participants were more likely to report “jumped.” Plotting conventions as in Figure 3g. F(2) = 22.20, p = 8.97 × 10−7 on a repeated-measures ANOVA. Post hoc comparisons using a Tukey’s HSD test showed that high prior Criterion values (−0.11 ± 0.10) was significantly lower than baseline (0.30 ± 0.08; p = 0.00028) and low prior (0.48 ± 0.06; p = 7.16 × 10−7) values. Low prior and baseline values were not significantly different from each other (p = 0.11137). b, The difference in Criterion values between low and high priors was higher in the medium-noise condition (0.54 ± 0.13) than in the high-noise condition (0.21 ± 0.12; p = 0.0055 on a paired t test). In other words, prior use as measured by Criterion differences decreased as sensory uncertainty increased, the same result as when using intercept differences (compare Fig. 4e). Plotting conventions as in Figure 4e. Download Figure 4-1, TIF file.

  • Extended Data Figure 4-2

    Replication of the control experiment results using response rates for all displacements instead of intercepts. For both monkeys, S (a) and T (b), the difference in response rates decreased as sensory uncertainty increased (p = 1.57 × 10−10 on a Friedman test for Monkey S, and p = 0.0014 on a repeated-measures ANOVA for Monkey T). Post hoc comparisons using pairwise signed-rank exact tests showed that prior use in the high-noise condition (0.40 ± 0.04) was significantly lower than in the low (0.79 ± 0.02; p = 6 × 10−11) and medium-noise (0.57 ± 0.04; p = 2.28 × 10−7) conditions, and prior use was significantly different in the low-noise and medium-noise conditions (p = 8.85 × 10−6) for Monkey S. For Monkey T, post hoc comparisons using Tukey’s HSD tests showed that prior use in the low-noise (0.55 ± 0.05) condition was significantly higher than in the medium-noise (0.39 ± 0.05; p = 0.0030) and high-noise (0.40 ± 0.05; p = 0.0056) conditions. In summary, they used their priors less with greater image noise, the same result as when using intercept differences (compare Fig. 4h,i). Plotting conventions as in Figure 4h,i. Download Figure 4-2, TIF file.

  • Extended Data Figure 4-3

    Prior use decreased with increasing sensory noise within each chronological half of the control experiment. a, b, Results for Monkey S (a, p = 2.28 × 10−9 on a repeated-measures ANOVA in the first half; b, p = 1.43 × 10−6 on a Friedman test in the second half). c, d, Results for Monkey T [c, p = 0.033 in the first half; d, p = 0.18 in the second half (i.e., decreasing but not significant) on repeated-measures ANOVAs]. For Monkey S in the first half, post hoc Tukey’s HSD comparisons for Monkey S showed that the intercept difference in the low-noise condition (0.75 ± 0.03) was significantly higher than in the medium-noise (0.56 ± 0.07; p = 0.0019) and high-noise (0.35 ± 0.06; p = 2.28 × 10−5) conditions, and in the medium-noise condition was significantly higher than in the high-noise condition (p = 0.00025). In the second half (paired signed-rank exact tests), the intercept difference in the low-noise condition (0.89 ± 0.02) was significantly higher than in the medium-noise (0.64 ± 0.07; p = 0.0031) and high-noise (0.46 ± 0.08; p = 9.57 × 10−5) conditions, and in the medium-noise condition was significantly higher than in the high-noise condition (p = 0.0014). For Monkey T in the first half, the intercept difference in the low-noise condition (0.43 ± 0.07) was significantly higher than in the medium-noise (0.27 ± 0.06; p = 0.04) condition, but not between the other conditions. Download Figure 4-3, TIF file.

  • Extended Data Figure 4-4

    Bayesian ideal observer model fits in Experiment 2 did not recapitulate the patterns observed in the data. a–c, The model recapitulated the observed patterns in the binned, empirical data reasonably well for the low-noise (a), medium-noise (b) conditions. However, for the high-noise condition (c), it systematically overestimated the probability of reporting “jumped” in the high prior condition, and therefore, prior use. d, e, Fit prior (d) and sensory noise (e) parameter values. f, Histogram of objective function (i.e., model error) values for all participants. g–i, Same as a–c, but for the four participants with the lowest model error values (<300). The same overall pattern of deviation from the data was observed, i.e., the model overestimated prior use in the high-noise condition. Fit lapse rates in the highest noise condition were higher than in the other two conditions (low noise: 0.04 ± 0.009, medium noise: 0.03 ± 0.01, high noise: 0.17 ± 0.05), and the widths of the “jump” distribution (3.03 ± 0.35) were higher than those of the “nonjump” distribution (0.47 ± 0.17) as expected. Download Figure 4-4, TIF file.

  • Extended Data Figure 5-1

    Incorporating a bias into the categorical Bayesian ideal observer model did not predict the anti-Bayesian results observed in Experiment 2. We modeled an opposite-to-saccade bias for displacements in the categorical Bayesian ideal observer model by shifting the “jump” (red) and “nonjump” (black) distributions from which displacements were drawn. a, For a left saccade, the distributions would shift rightward (indicated by the dashed line) and (b) for a right saccade, they would shift leftward. Since we take the absolute value of displacements to compute our logistic psychometric curves, negative (leftward) displacements and the distributions they are drawn from are mirrored about the y-axis. c, This resulted in a simulated bias >0 for jumps opposite to the saccade (corresponding to the blue shaded regions in a, b) and (d) a bias <0 for jumps in the direction of the saccade (gray regions in a, b). e–g, Simulated psychometric curves with a bias of +0.15° for the (e) low-noise, (f) medium-noise, and (g) high-noise conditions moved further apart with increasing sensory noise. h, Simulated intercept differences in the medium-noise and high-noise conditions (comparable to Fig. 3e) quantified the prediction that prior use increased with increasing noise. i–l, Same as in e–h but with a simulated bias of −15°. Download Figure 5-1, TIF file.

  • Extended Data Figure 7-1

    The direction of target displacement relative to the saccade did not influence the results of Experiment 4 (Monkey S). a–c, Data from displacements in the direction of the saccade. d–f, Data from displacements opposite to the direction of the saccade. a, d, Data from prior learning trials. The direction of target displacement relative to the saccade did not matter for Monkey S, as seen by comparing the data shown here with the pooled data of Figure 7a,d–f. Download Figure 7-1, TIF file.

  • Extended Data Figure 7-2

    Same as Extended Data Figure 7-1, but for Monkey T (compare Fig. 7b,g–i). Again, results were essentially unchanged; the direction of target displacement did not matter. Download Figure 7-2, TIF file.

  • Extended Data Figure 7-3

    Replication of the Experiment 4 (image noise) results using Criterion instead of intercepts. a, c, For both monkeys, Criterion decreased with the prior magnitude, demonstrating that they learned the priors in training trials (a: 0.74 [0.67 0.81], −0.11 [−0.17 −0.05], and −0.44 [−0.51 −0.37] for low prior, baseline, and high prior, respectively, for Monkey S, and c: 0.39 [0.32 0.47], −0.08 [−0.13 −0.02], and −0.25 [−0.32 −0.18] for Monkey T). A lower Criterion value meant that participants were more likely to report “jumped.” Plotting conventions as in Figure 7c, except for plotting the results for each monkey separately here. b, d, For both monkeys, Criterion difference between low and high priors in the medium-noise condition (b: 0.67 [0.51 0.81] for Monkey S and d: 0.37 [0.21 0.50] for Monkey T) were higher than in the high-noise condition (b: 0.08 [−0.05 0.21] for Monkey S and d: 0.16 [0.02 0.30] for Monkey T). In other words, the monkeys used their priors less with greater image noise, the same result as when using intercept differences (compare Fig. 7f,i). Plotting conventions as in Figure 7f,i. Download Figure 7-3, TIF file.

  • Extended Data Figure 7-4

    Bayesian Ideal Observer model fits to data in Experiment 4 produced anti-Bayesian best-fit parameters (Monkey S). a–c, The model recapitulated the observed patterns in the binned, empirical data for the low-noise (a), medium-noise (b), and high-noise (c) conditions. Although the best-fit output parameters increased with increasing priors [d, −0.3, 0.5, and 0.70 for the P(J) = 0.2, P(J) = 0.5, and P(J) = 0.8 conditions, respectively], the output parameters for the sensory noise level were the opposite of those expected by increasing the target blurriness (e, 0.64°, 0.64°, and 0.44° for the low-noise, medium-noise, and high-noise conditions, respectively; highlighted by red dashed box). f, Best-fit parameters for widths of the “jump” (3.27°) and “nonjump” (0.0003°) qualitatively matched the directions of the values used in the experiment. The fit lapse rates increased with sensory noise as expected (for low, medium, and hig, respectively, the fit lapse rates were 0.03, 0.08, and 0.36). Download Figure 7-4, TIF file.

  • Extended Data Figure 7-5

    Same as Extended Data Figure 7-4, but for Monkey T. a–c, Again, the model recapitulated the observed patterns in the binned, empirical data for the low-noise (a), medium-noise (b), and high-noise (c) conditions. Although the best-fit output parameters qualitatively increased with increasing priors [d, 0.51, 0.53, and 0.54 for the P(J) = 0.2, P(J) = 0.5, and P(J) = 0.8 conditions, respectively], the output parameters for the sensory noise level were the opposite of those expected by increasing the target blurriness (e, 0.61°, 0.60°, and 0.08° for the low-noise, medium-noise, and high-noise conditions, respectively; highlighted by red dashed box). f, Best-fit parameters for widths of the “jump” (8.79°) and “nonjump” (2.99°) qualitatively matched the directions of the values used in the experiment. The fit lapse rates largely increased with sensory noise (for low, medium, and high noise, respectively, the fit lapse rates were 0.09, 0.08, and 0.25 for Monkey T). Download Figure 7-5, TIF file.

  • Extended Data Figure 8-1

    Replication of the Experiment 5 (motor-driven noise) results using Criterion instead of intercepts. For both Monkey S (a) and Monkey T (b), the Criterion difference in the with-saccade condition (S: 1.21 [1.06 1.36], T: 0.72 [0.58 0.86]) was higher than in the no saccade condition (S: 0.59 [0.38 0.81], T: 0.17 [−0.01 0.33]), indicative of increased prior use with uncertainty and therefore Bayesian behavior. This is the same result found using intercepts (compare Fig. 8f,i). Download Figure 8-1, TIF file.

  • Extended Data Figure 8-2

    The direction of target displacement relative to the saccade did not influence the results of Experiment 5 (motor-driven noise). As with the categorical image noise experiments (Extended Data Fig. 3-1), the results did not change when data were split by direction of target displacement relative to the saccade. For both Monkeys S (a–c) and T (d–f), psychometric curves for the different prior conditions were further apart in the with saccade conditions regardless of the direction of the displacement (b, c, e, f) than in the no saccade condition (a, d). That is, they used their priors more when experiencing motor-driven noise than without motor-driven noise. These are essentially the same results as found when the directions of target displacements were pooled (compare Fig. 8d,e,g,h). Download Figure 8-2, TIF file.

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Bayesian and Discriminative Models for Active Visual Perception across Saccades
Divya Subramanian, John M. Pearson, Marc A. Sommer
eNeuro 14 July 2023, 10 (7) ENEURO.0403-22.2023; DOI: 10.1523/ENEURO.0403-22.2023

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Bayesian and Discriminative Models for Active Visual Perception across Saccades
Divya Subramanian, John M. Pearson, Marc A. Sommer
eNeuro 14 July 2023, 10 (7) ENEURO.0403-22.2023; DOI: 10.1523/ENEURO.0403-22.2023
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  • active perception
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