Article Information
- Received August 20, 2023
- Revision received October 16, 2023
- Accepted November 20, 2023
- Published online November 28, 2023.
Author Information
- Matthew A. T. Elliott1,2,3,*,
- Hunter E. Schweiger1,2,4,*,
- Ash Robbins1,2,5,*,
- Samira Vera-Choqqueccota1,2,3,
- Drew Ehrlich1,2,6,
- Sebastian Hernandez1,2,5,
- Kateryna Voitiuk1,2,3,
- Jinghui Geng1,2,5,
- Jess L. Sevetson1,4,
- Cordero Core7,
- Yohei M. Rosen1,2,
- Mircea Teodorescu1,2,3,5,
- Nico O. Wagner8,
- David Haussler1,2,3 and
- Mohammed A. Mostajo-Radji1,2
- 1Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95060
- 2Live Cell Biotechnology Discovery Lab, University of California Santa Cruz, Santa Cruz, CA 95060
- 3Department of Biomolecular Engineering, University of California Santa Cruz, Santa Cruz, CA 95060
- 4Department of Molecular, Cell and Developmental Biology, University of California Santa Cruz, Santa Cruz, CA 95060
- 5Department of Electrical and Computer Engineering, University of California Santa Cruz, Santa Cruz, CA 95060
- 6Department of Computational Media, University of California Santa Cruz, Santa Cruz, CA 95060
- 7Scientific Software Engineering Center, eScience Institute, University of Washington, Seattle, WA 98195
- 8College of Arts and Sciences, University of San Francisco, San Francisco, CA 94117
- Correspondence should be addressed to Mohammed A. Mostajo-Radji at mmostajo{at}ucsc.edu.
Author contributions
Author contributions: M.A.T.E., H.E.S., A.R., N.O.W., D.H., and M.A.M.-R. designed research; M.A.T.E., H.E.S., A.R., S.V.-C., D.E., K.V., J.G., and J.L.S. performed research; D.E., C.C., and Y.M.R. contributed unpublished reagents/analytic tools; M.A.T.E., H.E.S., A.R., and S.H. analyzed data; M.A.T.E., H.E.S., A.R., M.T., N.O.W., D.H., and M.A.M.-R. wrote the paper.
↵* M.A.T.E., H.E.S., and A.R. contributed equally to this work.
Disclosures
M.A.M.-R. is a cofounder of Paika, a company for remote people-to-people interactions. All other authors declare no competing financial interests.
This work was supported by the Schmidt Futures Grant SF857 (to M.T. and D.H.); the National Human Genome Research Institute Grant 1RM1HG011543 (to M.T. and D.H.); National Science Foundation Grants NSF2134955 (to M.T. and D.H.) and NSF2034037 (to M.T.); the National Institute of Mental Health Grant 1U24MH132628 (to D.H. and M.A.M.-R.). H.E.S. is a National Science Foundation Graduate Student Research Fellowship grantee. K.V. was supported by the ARCS Foundation and the National Human Genome Research Institute (NHGRI) Grant T32HG012344. J.L.S. was supported by the University of California Santa Cruz Chancellor’s Postdoctoral Fellowship, the National Institutes of Health Grant K12GM139185 (through National Institute of General Medical Sciences to University of California Santa Cruz Institute for the Biology of Stem Cells), and the National Institute of Child Health and Human Development Grant LRP0000018281. We are thankful to the Pacific Research Platform, supported by the National Science Foundation under Award Numbers CNS-1730158, ACI-1540112, ACI-1541349, and OAC-1826967; the University of California Office of the President; and the University of California San Diego’s California Institute for Telecommunications and Information Technology/Qualcomm Institute. Thanks to CENIC for the 100 Gbps networks. This research received software engineering support from the University of Washington’s Scientific Software Engineering Center (SSEC) supported by Schmidt Futures, as part of the Virtual Institute for Scientific Software (VISS).
Funding
Schmidt Futures
SF857HHS | NIH | National Human Genome Research Institute (NHGRI)
1RM1HG011543National Science Foundation (NSF)
NSF2134955; NSF2034037HHS | NIH | National Institute of Mental Health (NIMH)
1U24MH132628
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