Table 2.

Tissue and cell type distribution of Arhgap39/Porf-2 expression in human, mouse, rat, and fruit fly

Type of tissue or cellLocation (species)Method of detection
BrainHippocampus (R, M, H)N, NPA, RNAi, IHC
Hypothalamus (R)N, NPA, ISH
Cerebral cortex (R, M)N, NPA, IHC; RNA Seq (Yue et al., 2014)
Cerebellum (R, M)N, RNA Seq (Yue et al., 2014)
Amygdala (R)ISH
Ventral neuropil (D)ISH (Lundström et al., 2004)
Peripheral nervous systemTracheal ganglia (D)RNAi (Lundström et al., 2004)
Endocrine organsTestes (R, H, M)N, ISH, EST
Anterior pituitary (R)N
Adrenal (H, M, R)N, RNA Seq (Yu et al., 2014; Yue et al., 2014)
Placenta (H, R, M)N, EST (Ko et al., 2000); RNA Seq (Yu et al., 2014; Yue et al., 2014)
Ovary (M, H)RNA Seq (Yue et al., 2014; Fagerberg et al., 2014)
Adipose tissue (M, H)RNA Seq (Yue et al., 2014; Fagerberg et al., 2014)
Mammary gland (M)RNA Seq (Yue et al., 2014)
Thyroid (H)RNA Seq (Fagerberg et al., 2014)
Pancreas (H)RNA Seq (Fagerberg et al., 2014)
Other organsProstate (H, R)N, RNA Seq
Liver (R, H, M)N, PCR, WB; RNA Seq (Yue et al., 2014)
Skin (M, H)EST (Miki et al., 2001); RNA Seq (Fagerberg et al., 2014)
Uterus (R, H)RNA Seq (Yu et al., 2014; Fagerberg et al., 2014)
Lung (R, H)RNA Seq (Yu et al., 2014; Fagerberg et al., 2014)
Spleen (R, H)RNA Seq (Yu et al., 2014); RNA Seq (Fagerberg et al., 2014)
Heart (R, M)RNA Seq (Yu et al., 2014; Yue et al., 2014)
Thymus (R, M)RNA Seq (Yu et al., 2014; Yue et al., 2014)
Skeletal Muscle (R, M)RNA Seq (Yu et al., 2014; Yue et al., 2014)
GI tract (M, H)RNA Seq (Yue et al., 2014; Fagerberg et al., 2014)
Bladder (M)RNA Seq (Yue et al., 2014)
Kidney (R, H)PCR; RNA Seq (Fagerberg et al., 2014)
CellsFRTL-5 (R thyroid-like)WB, PCR
Pancreatic beta cells (H)PCR (Wang, 2011)
cos7 cells (nhP kidney)PAGE
C17.2 (M cerebellar stem)PCR, WB
GT-1 (M hypothalamic neuron)WB
Vascular endothelial (H)IP (Kaur et al., 2008)
Melanocytes (H)ASSET (Watahiki et al., 2004)
  • D, Drosophila; H, human; M, mouse; nhP, nonhuman primate; R, rat; ASSET, alternative splicing sequence enriched tag; ISH, in situ hybridization; IP, immunoprecipitation; IHC, immunohistochemistry; N, Northern blot; NPA, nuclease protection assay; WB, Western blot. Unless otherwise noted, determinations were made in the authors lab.